Library

2025 | Journal paper

Adapting a global plant identification model to detect invasive alien plant species in high-resolution road side images

Authors: Vincent Espitalier, Hervé Goëau, Christophe Botella, Mads Dyrmann, Toke T. Hoye, Pierre Bonnet, Alexis Joly

Status: Published
Journal: Ecological Informatics
Volume/Issue: Volume 89, November 2025
Publisher: Elsevier

2025 | Journal paper

Adapting a global plant identification model to detect invasive alien plant species in high-resolution roadside images

Authors: Vincent Espitalier, Jean-Christophe Lombardo, Hervé Goëau, Christophe Botella, Toke Thomas Høye, Mads Dyrmann, Pierre Bonnet, Alexis Joly

Status: Published
Journal: Ecological Informatics
Volume/Issue: 89
Publisher: Elsevier

2025 | Journal paper

Data of vegetation structure metrics retrieved from airborne laser scanning surveys for European demonstration sites

Authors: W. Daniel Kissling, Wessel Mulder, Jinhu Wang, Yifang Shi

Status: Published
Journal: Data in Brief
Volume/Issue: 60
Publisher: Elsevier

2025 | Journal paper

Emerging technologies for pollinator monitoring

Authors: Toke T Høye, Matteo Montagna, Bas Oteman, David B Roy

Status: Published
Journal: Current Opinion in Insect Science
Volume/Issue: 69
Publisher: Elsevier

2025 | Other

Learning the syntax of plant assemblages

Authors: César Leblanc, Pierre Bonnet, Alexis Joly, et al.

Status: Published
Journal: British Ecological Society
Publisher: Nature Portfolio

2025 | Journal paper

Cooperative learning of Pl@ntNet's Artificial Intelligence algorithm: how does it work and how can we improve it?

Authors: Tanguy Lefort, Antoine Affouard, Benjamin Charlier, Jean-Christophe Lombardo, Mathias Chouet, Hervé Goëau, Joseph Salmon, Pierre Bonnet, Alexis Joly

Status: Published
Journal: Methods in Ecology and Evolution
Volume/Issue: Volume 16, Issue 2
Publisher: Wiley

2025 | Other

A predictive approach to determining the joint conservation status of species | Une approche prédictive de la détermination du statut de conservation conjoint des espèces

Authors: Joaquim Estopinan

Status: Published
Journal: AGRIS - International System for Agricultural Science and Technology
Publisher: HAL CCSD

2024 | Journal paper

Towards consistently measuring and monitoring habitat condition with airborne laser scanning and unmanned aerial vehicles

Authors: W.D. Kissling, Y. Shi, J.Wang, A.Walicka, C.George, J.E. Moeslund, F. Gerard

Status: Published
Journal: Ecological Indicators
Volume/Issue: 169
Publisher: Elsevier

2024 | Journal paper

A deep-learning framework for enhancing habitat identification based on species composition

Authors: César Leblanc, Pierre Bonnet, Maximilien Servajean, Milan Chytrý, Svetlana Aćić, Olivier Argagnon, Ariel Bergamini, Idoia Biurrun, Gianmaria Bonari, Juan A. Campos, Andraž Čarni, Renata Ćušterevska, Michele De Sanctis, Jürgen Dengler, Emmanuel Garbolino, Valentin Golub, Ute Jandt, Florian Jansen, Maria Lebedeva, Jonathan Lenoir, Jesper Erenskjold Moeslund, Aaron Pérez-Haase, Remigiusz Pielech, Jozef Šibík, Zvjezdana Stančić, Angela Stanisci, Grzegorz Swacha, Domas Uogintas, Kiril Vassilev, Thomas Wohlgemuth, Alexis Joly

Status: Published
Journal: Applied Vegetation Science
Volume/Issue: 27/3
Publisher: IAVS

2024 | Proceedings paper

MALPOLON: A Framework for Deep Species Distribution Modeling

Authors: Theo Larcher, Lukas Picek, Benjamin Deneu, Titouan Lorieul, Maximilien Servajean, Alexis Joly

Status: Published
Journal: Machine Vision for Earth Observation

2024 | Proceedings paper

Overview of LifeCLEF 2024: Challenges on Species Distribution Prediction and Identification

Authors: Alexis Joly, Lukáš Picek, Stefan Kahl, Hervé Goëau, Vincent Espitalier, Christophe Botella, Diego Marcos, Joaquim Estopinan, Cesar Leblanc, Théo Larcher, Milan Šulc, Marek Hrúz, Maximilien Servajean, Hervé Glotin, Robert Planqué, Willem-Pier Vellinga, Holger Klinck, Tom Denton, Ivan Eggel, Pierre Bonnet, Henning Müller

Status: Published
Journal: Experimental IR Meets Multilinguality, Multimodality, and Interaction
Publisher: Springer

2024 | Proceedings paper

AI Species Identification Using Image and Sound Recognition for Citizen Science, Collection Management and Biomonitoring: From Training Pipeline to Large-Scale Models

Authors: Laurens Hogeweg, Ni Yan, Django Brunink, Khadija Ezzaki-Chokri, Wilfred Gerritsen, Rita Pucci, Burooj Ghani, Dan Stowell, Vincent J. Kalkman

Status: Published
Proceedings: Biodiversity Information Standards (TDWG)
Volume/Issue: 2024
Publisher: Pensoft Publishers

2024 | Deliverable

D2.3 Deliver framework and its technical implementation of MAMBO tools and technology supporting EU Pollinator Initiative

Authors: Ana Maria Feijoo Quezada, Koos Biesmeijer, Niels Raes

Status: Subject to change
Deliverable number: D2.3

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2024 | Other

GeoPlant: Spatial Plant Species Prediction Dataset

Authors: Lukas Picek, Christophe Botella, Maximilien Servajean, César Leblanc, Rémi Palard, Théo Larcher, Benjamin Deneu, Diego Marcos, Pierre Bonnet, Alexis Joly

Status: Published

2024 | Journal paper

Can we harmonize the monitoring of plants and pollinators? Meeting report on the symposium ‘New solutions to monitor plants, pollinators and their interactions in a changing world’, held at Collège de France and Muséum national d'Histoire naturelle, Paris

Authors: Emmanuelle Porcher, Pierre Bonnet, Christian Damgaard, Pieter De Frenne, Nicolas Deguines, Bodil K. Ehlers, Jérôme Frei, María B. García, Clément Gros, Ute Jandt, Alexis Joly, Gabrielle Martin, Denis Michez, Oliver L. Pescott, Tobias Roth, Donald Waller

Status: Published
Journal: New Phytologist
Volume/Issue: 244/1
Publisher: New Phytologist Foundation